Thesis Details

Optimalizace algoritmu pro detekci G-kvadruplexů

Bachelor's Thesis Student: Labudová Dominika Academic Year: 2018/2019 Supervisor: Hon Jiří, Ing., Ph.D.
English title
Optimization of G-Quadruplex Identification Algorithm
Language
Czech
Abstract

Identification of G-quadruplexes in DNA has been the interest of many studies  in recent years. As a result, many identification tools were created. This bachelor's thesis focuses on analysis and optimization of a tool called pqsfinder along with creating a web interface for this tool. The optimization provided significant increase in the algorithm's speed and ability to process long DNA sequences. The web interface was designed and implemented using modern and effective technologies with emphasis on the user friendliness of the web application.

Keywords

DNA, G-quadruplex, analysis, optimization, web application, GUI, React

Department
Department of Information Systems FIT BUT
Degree Programme
Information Technology
Files
Status
defended, grade A
Date
13 June 2019
Reviewer
Martínek Tomáš, doc. Ing., Ph.D.
Committee
Sekanina Lukáš, prof. Ing., Ph.D. (DCSY FIT BUT), předseda
Fuchs Petr, RNDr., Ph.D. (DMAT FEEC BUT), člen
Křivka Zbyněk, Ing., Ph.D. (DIFS FIT BUT), člen
Martínek Tomáš, doc. Ing., Ph.D. (DCSY FIT BUT), člen
Zbořil František V., doc. Ing., CSc. (DITS FIT BUT), člen
Citation
LABUDOVÁ, Dominika. Optimalizace algoritmu pro detekci G-kvadruplexů. Brno, 2019. Bachelor's Thesis. Brno University of Technology, Faculty of Information Technology. 2019-06-13. Supervised by Hon Jiří. Available from: https://www.fit.vut.cz/study/thesis/20792/
BibTeX 
@bachelorsthesis{FITBT20792,
    author = "Dominika Labudov\'{a}",
    type = "Bachelor's thesis",
    title = "Optimalizace algoritmu pro detekci G-kvadruplex\r{u}",
    school = "Brno University of Technology, Faculty of Information Technology",
    year = 2019,
    location = "Brno, CZ",
    language = "czech",
    url = "https://www.fit.vut.cz/study/thesis/20792/"
}

Theses

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