Thesis Details

Interactive Database for the Storage and Maintenance of the Biological Data

Master's Thesis Student: Dúbrava Juraj Ondrej Academic Year: 2020/2021 Supervisor: Musil Miloš, Ing., Ph.D.
Czech title
Interaktivní databáze pro úschovu a údržbu biologických dat
Language
English
Abstract

The main focus of this thesis is to develop a novel database of protein stability data that will focus on storage and maintenance of the experimental data. The result is a novel database FireProtDB, providing manually curated experimental data from all available sources, while presenting the data via implemented graphical user interface. The user interface provides all necessary information stored in the database with ability to search data using advanced search engine to create customized search queries targeting users seeking data for construction of the machine learning datasets.

Keywords

protein stability, mutations, database, machine learning, manual curation

Department
Department of Information Systems FIT BUT
Degree Programme
Information Technology, Field of Study Bioinformatics and Biocomputing
Files
Status
defended, grade A
Date
21 June 2021
Reviewer
Martínek Tomáš, doc. Ing., Ph.D.
Committee
Sekanina Lukáš, prof. Ing., Ph.D. (DCSY FIT BUT), předseda
Drábek Vladimír, doc. Ing., CSc. (DCSY FIT BUT), člen
Fučík Otto, doc. Dr. Ing. (DCSY FIT BUT), člen
Křivka Zbyněk, Ing., Ph.D. (DIFS FIT BUT), člen
Martínek Tomáš, doc. Ing., Ph.D. (DCSY FIT BUT), člen
Smrčka Aleš, Ing., Ph.D. (DITS FIT BUT), člen
Citation
DÚBRAVA, Juraj. Interactive Database for the Storage and Maintenance of the Biological Data. Brno, 2021. Master's Thesis. Brno University of Technology, Faculty of Information Technology. 2021-06-21. Supervised by Musil Miloš. Available from: https://www.fit.vut.cz/study/thesis/23790/
BibTeX 
@mastersthesis{FITMT23790,
    author = "Ondrej Juraj D\'{u}brava",
    type = "Master's thesis",
    title = "Interactive Database for the Storage and Maintenance of the Biological Data",
    school = "Brno University of Technology, Faculty of Information Technology",
    year = 2021,
    location = "Brno, CZ",
    language = "english",
    url = "https://www.fit.vut.cz/study/thesis/23790/"
}

Theses

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