Jiří Jaroš

Publikace

• 2025

  OLŠÁK, O.; BAYER, D.; JAROŠ, J. Accelerating Two-Dimensional k-Wave Ultrasound Simulations Through Pruned FFT: A Treatment Planning Optimisation. Computational Science - ICCS 2025 Workshops. Lecture Notes in Computer Science, vol 15908. Cham: Springer Nature Switzerland AG, 2025. p. 67-82. ISBN: 978-3-031-97557-8. Detail

• 2024

  BAYER, D.; JAROŠ, J. MATLAB Interface To The afft Library. Ostrava: 2024. Detail

  HUYNH, N.; ZHANG, E.; FRANCIES, O.; KUKLIŠ, F.; ALLEN, T.; ZHU, J.; ABEYAKOON, O.; LUCKA, F.; BETCKE, M.; JAROŠ, J.; ARRIDGE, S.; COX, B.; PLUMB, A.; BEARD, P. A fast all-optical 3D photoacoustic scanner for clinical vascular imaging. Nature Biomedical Engineering, 2024, vol. 8, no. 10, p. 1-18. ISSN: 2157-846X. Detail

  JAROŠ, J.; BAYER, D. afft: a C++17 Wrapper Library for FFT-like Computations on Various Targets. Soláň: 2024. Detail

  JAROŠ, J.; DUCHOŇ, R. Acceleration of Ultrasound Neurostimulation Using Mixed-Precision Arithmetic. HPDC '24: Proceedings of the 33rd International Symposium on High-Performance Parallel and Distributed Computing. New York: Association for Computing Machinery, 2024. p. 370-372. ISBN: 979-8-4007-0413-0. Detail

  JAROŠ, J.; CHLEBÍK, J. Enhancing Acoustic Neural Predictors with Heterogeneous Density. Soláň: 2024. Detail

  JAROŠ, J.; JAROŠ, M.; BUCHTA, M. Estimation of Distributed Ultrasound Simulation Execution Time Using Machine Learning. In 2024 IEEE Congress on Evolutionary Computation (CEC). Yokohama: Institute of Electrical and Electronics Engineers, 2024. p. 1-8. ISBN: 979-8-3503-0836-5. Detail

  JAROŠ, J.; MAJER, M.; HORKÝ, J.; VÁVRA, J. Web-Based Simulator of Superscalar RISC-V Processors. Atlanta, GA: 2024. p. 1-2. Detail

  JAROŠ, J.; MAJER, M.; HORKÝ, J.; VÁVRA, J. Web-Based Simulator of Superscalar RISC-V Processors. In Proceedings of SC 2024-W: Workshops of the International Conference for High Performance Computing, Networking, Storage and Analysis. Atlanta, GA: Institute of Electrical and Electronics Engineers, 2024. p. 1676-1684. ISBN: 979-8-3503-5554-3. Detail

  JAROŠ, J.; TREEBY, B.; JAROŠ, M. k-Plan: From the Hospital to the Cluster and Back. Sydney: 2024. Detail

  JAROŠ, M.; JAROŠ, J. k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading. Solan: 2024. Detail

  JAROŠ, M.; JAROŠ, J. k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading. In HPDC '24: Proceedings of the 33rd International Symposium on High-Performance Parallel and Distributed Computing. New York: Association for Computing Machinery, 2024. p. 358-360. ISBN: 979-8-4007-0413-0. Detail

  KUNÍK, O.; JAROŠ, J. Accelerating Hybrid Local Domain Decomposition for the k-Wave Toolbox on Multi-GPU Systems. Ostrava: 2024. Detail

  OLŠÁK, O.; JAROŠ, J. Investigating the Possibility of Using Pruned FFT in Ultrasound Wave Propagation Simulations. Ostrava: 2024. Detail

  OLŠÁK, O.; JAROŠ, J. Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations. Soláň: 2024. Detail

  OLŠÁK, O.; JAROŠ, J. On the usage of the Sparse Fourier Transform in ultrasound propagation simulation. In ICBRA '23: Proceedings of the 10th International Conference on Bioinformatics Research and Applications. New York: Association for Computing Machinery, 2024. p. 107-113. ISBN: 979-8-4007-0815-2. Detail

  OLŠÁK, O.; JAROŠ, J. Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations. In HPDC '24: Proceedings of the 33nd International Symposium on High-Performance Parallel and Distributed Computing. New York: Association for Computing Machinery, 2024. p. 361-363. ISBN: 979-8-4007-0413-0. Detail

• 2023

  BAYER, D.; JAROŠ, J. Acceleration of Heat Diffusion Simulation on Single-Node Systems. Ostrava: 2023. Detail

  CHLEBÍK, J.; JAROŠ, J. Evolutionary Exploration of a Neural Network for Predicting Ultrasound Propagation. Ostrava: 2023. Detail

  CHLEBÍK, J.; JAROŠ, J. Evolutionary Optimization of a Focused Ultrasound Propagation Predictor Neural Network. GECCO 2023 Companion - Proceedings of the 2023 Genetic and Evolutionary Computation Conference Companion. Lisbon: Association for Computing Machinery, 2023. p. 635-638. ISBN: 979-8-4007-0120-7. Detail

  JAROŠ, M.; JAROŠ, J. Optimization of Execution Parameters of Moldable Ultrasound Workflows Under Incomplete Performance Data. In Job Scheduling Strategies for Parallel Processing. Lecture Notes in Computer Science, LNCS 13592. Virtual Event: Springer Nature Switzerland AG, 2023. p. 152-171. ISBN: 978-3-031-22697-7. Detail

• 2022

  AUBRY, J.; BATES, O.; BOEHM, C.; PAULY, K.; CHRISTENSEN, D.; CUETO, C.; GÉLAT, P.; GUASCH, L.; JAROŠ, J.; JING, Y.; JONES, R.; LI, N.; MARTY, P.; MONTANARO, H.; NEUFELD, E.; PICHARDO, S.; PINTON, G.; PULKKINEN, A.; STANZIOLA, A.; THIELSCHER, A.; TREEBY, B.; VAN 'T WOUT, E. Benchmark problems for transcranial ultrasound simulation: Intercomparison of compressional wave models. Journal of the Acoustical Society of America, 2022, vol. 152, no. 2, p. 1003-1019. ISSN: 1520-8524. Detail

  CHLEBÍK, J.; JAROŠ, J. Evolutionary NAS for Topology of an Acoustic Propagation Predictor. Soláň: 2022. Detail

  JAROŠ, M.; JAROŠ, J. k-Dispatch's Performance Modules for Advanced Workflow Submission. Soláň: 2022. Detail

  JAROŠ, M.; TREEBY, B.; JAROŠ, J. k-Plan: From the Hospital to the Cluster and Back. Ostrava: 2022. Detail

  OLŠÁK, O.; JAROŠ, J. Comparison of SpFFT and FFTW3 library. Soláň: 2022. Detail

  OLŠÁK, O.; JAROŠ, J. Evaluation of libraries for the one-dimensional sparse Fourier transform. Ostrava: 2022. Detail

• 2021

  JAROŠ, J. Handling C++ Exceptions in MPI Applications. The International Conference for High Performance Computing, Networking, Storage, and Analysis. St. Louis, MO, USA: 2021. Detail

  JAROŠ, M.; JAROŠ, J. k-Dispatch's Performance Modules for Advanced Workflow Submission. 5th Users' Conference of IT4Innovations. Ostrava: 2021. Detail

• 2018

  BORDOVSKÝ, G.; COX, B.; JAROŠ, J. Photoacoustic Tomography Using the k-Wave Toolbox. Ostrava: 2018. p. 1 (1 s.). Detail

  DANTUMA, M.; LUCKA, F.; TREEBY, B.; JAROŠ, J.; COX, B.; MANOHAR, S. Signal Frequency Content and Appearance of Tumors in Photoacoustic Breast Tomography: A Simulation. Caparica: 2018. p. 1 (1 s.). Detail

  JAROŠ, M.; TREEBY, B.; JAROŠ, J. Design of HIFU Treatment Plans using an Evolutionary Strategy. Ostrava: 2018. p. 1 (1 s.). Detail

  JAROŠ, M.; TREEBY, B.; JAROŠ, J. Design of HIFU treatment plans using an evolutionary strategy. In GECCO 2018 Companion - Proceedings of the 2018 Genetic and Evolutionary Computation Conference Companion. Kyoto: Association for Computing Machinery, 2018. p. 1568-1575. ISBN: 978-1-4503-5764-7. Detail

  KADLUBIAK, K.; JAROŠ, J.; TREEBY, B. GPU-accelerated Simulation of Elastic Wave Propagation. Frankfurt am Main: 2018. p. 0 (1 s.). Detail

  KADLUBIAK, K.; JAROŠ, J.; TREEBY, B. GPU-Accelerated simulation of elastic wave propagation. In Proceedings - 2018 International Conference on High Performance Computing and Simulation, HPCS 2018. Orleans: IEEE Computer Society, 2018. p. 188-195. ISBN: 978-1-5386-7878-7. Detail

  KADLUBIAK, K.; TREEBY, B.; JAROŠ, J. Fourth-order Time-stepping Scheme in Simulation of Ultrasound Propagation. Ostrava: 2018. p. 1 (1 s.). Detail

  KLEPÁRNÍK, P.; BAŘINA, D.; ZEMČÍK, P.; JAROŠ, J. Efficient Low-Resource Compression of HIFU Data. Information (Switzerland), 2018, vol. 9, no. 7, p. 1-14. ISSN: 2078-2489. Detail

  KLEPÁRNÍK, P.; ZEMČÍK, P.; JAROŠ, J. Efficient Lossy Compression of Ultrasound Data. In 2017 IEEE International Symposium on Signal Processing and Information Technology, ISSPIT 2017. Bilbao: Institute of Electrical and Electronics Engineers, 2018. p. 232-237. ISBN: 978-1-5386-4662-5. Detail

  KOZUBEK, T.; ČERMÁK, M.; TICHÝ, P.; BLAHETA, R.; ŠÍSTEK, J.; LUKÁŠ, D.; JAROŠ, J. HPCSE: 3rd International Conference on High Performance Computing in Science and Engineering. Lecture Notes in Computer Science. Cham: Springer International Publishing, 2018. ISBN: 978-3-319-97135-3. Detail

  SUOMI, V.; JAROŠ, J.; TREEBY, B.; CLEVELAND, R. Full Modeling of High-Intensity Focused Ultrasound and Thermal Heating in the Kidney Using Realistic Patient Models. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2018, vol. 65, no. 11, p. 2660-2670. ISSN: 0018-9294. Detail

  SUOMI, V.; TREEBY, B.; JAROŠ, J.; MAKELA, P.; ANTTINEN, M.; SAUNAVAARA, J.; SAINIO, T.; KIVINIEMI, A.; BLANCO, R. Transurethral ultrasound therapy of the prostate in the presence of calcifications: A simulation study. MEDICAL PHYSICS, 2018, vol. 45, no. 11, p. 4793-4805. ISSN: 0094-2405. Detail

  SUOMI, V.; TREEBY, B.; JAROŠ, J.; SAUNAVAARA, J.; KIVINIEMI, A.; BLANCO, R. The Effect of Tissue Physiological Variability on Transurethral Ultrasound Therapy of the Prostate. In 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). Honolulu, HI: Institute of Electrical and Electronics Engineers, 2018. p. 5701-5704. ISBN: 978-1-5386-3646-6. Detail

  TREEBY, B.; BUDISKÝ, J.; WISE, E.; JAROŠ, J.; COX, B. Rapid calculation of acoustic fields from arbitrary continuous-wave sources. Journal of the Acoustical Society of America, 2018, vol. 143, no. 1, p. 529-537. ISSN: 1520-8524. Detail

  TREEBY, B.; VAVERKA, F.; JAROŠ, J. Performance and Accuracy Analysis of Nonlinear k-Wave Simulations Using Local Domain Decomposition with an 8-GPU Server. Proceedings of Meetings on Acoustics, 2018, vol. 34, no. 1, p. 1-5. ISSN: 1939-800X. Detail

  VAVERKA, F.; ŠPEŤKO, M.; TREEBY, B.; JAROŠ, J. Optimization of Ultrasound Simulations on Multi-GPU Servers. Dallas: 2018. p. 1-2. Detail

  VAVERKA, F.; TREEBY, B.; JAROŠ, J. Running Large-Scale Ultrasound Simulations on Intel Xeon Phi (KNC) accelerators. Ostrava: 2018. p. 1 (1 s.). Detail

• 2017

  AHMED, H.; SHAH, T.; GEORGIOU, P.; JAROŠ, J.; PAYNE, H.; ALLEN, C.; GIBSON, E.; BARRATT, D.; TREEBY, B. Beam distortion due to gold fiducial markers during salvage high-intensity focused ultrasound in the prostate. MEDICAL PHYSICS, 2017, vol. 44, no. 2, p. 679-693. ISSN: 0094-2405. Detail

  BORDOVSKÝ, G.; JAROŠ, J. Optimization of Fracture Tests Simulation in Civil Engineering. Ostrava: 2017. p. 1 (1 s.). Detail

  JAROŠ, J. High Performance Computing in Ultrasound Cancer Treatment. Brno: 2017. Detail

  JAROŠ, J.; TREEBY, B.; GEORGIOU, P. Modelling Beam Distortion during Focused Ultrasound Surgery in the Prostate using k-Wave. In Supercomputing in Science and Engineering. Ostrava: VŠB-Technical University of Ostrava - IT4I, 2017. p. 205-207. ISBN: 978-80-248-4037-6. Detail

  JAROŠ, J.; TREEBY, B.; ROBERTSON, J. Convergence Testing of a k-space Pseudospectral Scheme for Transcranial Time-reversal Focusing. In Supercomputing in Science and Engineering. Ostrava: VŠB-Technical University of Ostrava - IT4I, 2017. p. 195-197. ISBN: 978-80-248-4037-6. Detail

  JAROŠ, M.; JAROŠ, J. Framework for Planning, Executing and Monitoring Cooperating Computations. Ostrava: 2017. Detail

  NIKL, V.; HRADECKÝ, M.; JAROŠ, J.; KELEČÉNI, J. The investigation of the ARMv7 and Intel Haswell architectures suitability for performance and energy-aware computing. In High Performance Computing. Lecture Notes in Computer Science. Cham: Springer International Publishing, 2017. p. 377-393. ISBN: 978-3-319-58666-3. Detail

  ROBERTSON, J.; COX, B.; JAROŠ, J.; TREEBY, B. Accurate simulation of transcranial ultrasound propagation for ultrasonic neuromodulation and stimulation. Journal of the Acoustical Society of America, 2017, vol. 141, no. 3, p. 1726-1738. ISSN: 1520-8524. Detail

  TREEBY, B.; BUDISKÝ, J.; WISE, E.; JAROŠ, J.; COX, B. Single-step Calculation of the Acoustic Field from Arbitrary Continuous-wave Sources. Ostrava: 2017. p. 1 (1 s.). Detail

  VAVERKA, F.; TREEBY, B.; JAROŠ, J. Running Large-Scale Ultrasound Simulations on 256 Salomon Nodes. Ostrava: 2017. p. 1 (1 s.). Detail

  VAVERKA, F.; TREEBY, B.; JAROŠ, J. Running Large-Scale Ultrasound Simulations on Piz Daint with 512 Pascal GPUs. Denver: 2017. p. 1 (1 s.). Detail

• 2016

  BREITENBACHER, D.; HOMOLIAK, I.; JAROŠ, J.; HANÁČEK, P. Impact of Optimization and Parallelism on Factorization Speed of SIQS. Journal on Systemics, Cybernetics and Informatics, 2016, vol. 14, no. 3, p. 51-58. ISSN: 1690-4524. Detail

  BREITENBACHER, D.; HOMOLIAK, I.; JAROŠ, J.; HANÁČEK, P. Impact of Optimization and Parallelism on Factorization Speed of SIQS. In Proceedings of The 20th World Multi-Conference on Systemics, Cybernetics and Informatics. Journal on Systemics, Cybernetics and Informatics. WMSCI 2016 - 20th World Multi-Conference on Systemics, Cybernetics and Informatics, Proceedings. Orlando: The International Institute of Informatics and Systemics, 2016. p. 55-62. ISBN: 978-1-941763-47-6. ISSN: 1690-4524. Detail

  BROWN, M.; JAROŠ, J.; COX, B.; TREEBY, B. Control of Broadband Optically Generated Ultrasound Pulses Using Binary Amplitude Holograms. Journal of the Acoustical Society of America, 2016, vol. 139, no. 4, p. 1637-1647. ISSN: 1520-8524. Detail

  JAROŠ, J.; RENDELL, A.; TREEBY, B. Full-wave nonlinear ultrasound simulation on distributed clusters with applications in high-intensity focused ultrasound. International Journal of High Performance Computing Applications, 2016, vol. 30, no. 2, p. 137-155. ISSN: 1741-2846. Detail

  JAROŠ, J.; VAVERKA, F.; TREEBY, B. Spectral Domain Decomposition Using Local Fourier Basis: Application to Ultrasound Simulation on a Cluster of GPUs. Salt Lake City: 2016. p. 1 (1 s.). Detail

  JAROŠ, J.; VAVERKA, F.; TREEBY, B. Spectral Domain Decomposition Using Local Fourier Basis: Application to Ultrasound Simulation on a Cluster of GPUs. International Journal of Supercomputing Frontiers and Innovations, 2016, vol. 3, no. 3, p. 40-55. ISSN: 2313-8734. Detail

  MERTA, M.; ZAPLETAL, J.; JAROŠ, J. Many Core Acceleration of the Boundary Element Method. In Proceedings of High Performance Computing in Science and Engineering. Lecture Notes in Computer Science. Basel: Springer International Publishing, 2016. p. 116-125. ISBN: 978-3-319-40360-1. Detail

  SUOMI, V.; JAROŠ, J.; TREEBY, B.; CLEVELAND, R. Nonlinear 3-D simulation of high-intensity focused ultrasound therapy in the kidney. In 38th Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society (EMBC). Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. Orlando: Institute of Electrical and Electronics Engineers, 2016. p. 5648-5651. ISBN: 978-1-4577-0220-4. Detail

  TREEBY, B.; JAROŠ, J.; COX, B. Advanced photoacoustic image reconstruction using the k-Wave toolbox. In Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. San Francisco: SPIE - the international society for optics and photonics, 2016. p. 1-14. ISBN: 978-1-62841-942-9. Detail

  VAVERKA, F.; TREEBY, B.; JAROŠ, J. Acceleration of Ultrasound Wave Propagation using a Cluster of GPUs. Frankfurt am Main: 2016. p. 1 (1 s.). Detail

• 2015

  GROEN, D.; CHACRA, D.; NASH, R.; JAROŠ, J.; BERNABEU, M.; COVENEY, P. Weighted Decomposition in High-Performance Lattice-Boltzmann Simulations: Are Some Lattice Sites More Equal than Others?. In Solving Software Challengesfor Exascale. Lecture Notes in Computer Science. Stockholm: Springer Verlag, 2015. p. 28-38. ISBN: 978-3-319-15975-1. Detail

  JAROŠ, J.; DOHNAL, M.; TREEBY, B. Large-scale Ultrasound Simulations with Local Fourier Basis Decomposition. The International Conference for High Performance Computing, Networking, Storage Analysis, SC15. Austin: 2015. Detail

  JAROŠ, J.; MAREK, J.; MENŠÍK, P. Optimisation of Water Management Systems Using a GPU-Accelerated Differential Evolution. In Proceedings - 2015 IEEE Symposium Series on Computational Intelligence, SSCI 2015. Cape Town: IEEE Computer Society, 2015. p. 1727-1734. ISBN: 978-1-4799-7560-0. Detail

  JAROŠ, J.; NIKL, V.; TREEBY, B. Large-scale Ultrasound Simulations Using the Hybrid OpenMP/MPI Decomposition. Proceedings of the 3rd International Conference on Exascale Applications and Software. Edinburgh: Association for Computing Machinery, 2015. p. 115-119. ISBN: 978-0-9926615-1-9. Detail

• 2014

  JAROŠ, J.; TYRALA, R. GPU-accelerated Evolutionary Design of the Complete Exchange Communication on Wormhole Networks. In GECCO 2014 - Proceedings of the 2014 Genetic and Evolutionary Computation Conference. New York, NY: Association for Computing Machinery, 2014. p. 1023-1030. ISBN: 978-1-4503-2662-9. Detail

  NIKL, V.; JAROŠ, J. Parallelisation of the 3D Fast Fourier Transform Using the Hybrid OpenMP/MPI Decomposition. In Mathematical and Engineering Methods in Computer Science. Lecture Notes in Computer Science. Heidelberg: Springer International Publishing, 2014. p. 100-112. ISBN: 978-3-319-14895-3. Detail

  TREEBY, B.; JAROŠ, J.; ROHRBACH, D.; COX, B. Modelling elastic wave propagation using the k-Wave MATLAB toolbox. In IEEE International Ultrasonics Symposium, IUS. Chicago, IL: Institute of Electrical and Electronics Engineers, 2014. p. 146-149. ISBN: 978-1-4799-7049-0. Detail

  ZÁŇ, D.; JAROŠ, J. Solving the Multidimensional Knapsack Problem using a CUDA Accelerated PSO. In Proceedings of the 2014 IEEE Congress on Evolutionary Computation, CEC 2014. Beijing: IEEE Computational Intelligence Society, 2014. p. 2933-2939. ISBN: 978-1-4799-1488-3. Detail

• 2013

  BASERMANN, A.; MATURA, G.; CHEN, F.; FLATKEN, M.; GERNDT, A.; HETHERINGTON, J.; KRÜGER, T.; JAROŠ, J.; NASH, R. Exascale Pre and Post Processing. Barcelona: 2013. Detail

• 2012

  JAROŠ, J. Multi-GPU Island-Based Genetic Algorithm Solving the Knapsack Problem. In 2012 IEEE Congress on Evolutionary Computation, CEC 2012. CA: Institute of Electrical and Electronics Engineers, 2012. p. 217-224. ISBN: 978-1-4673-1508-1. Detail

  JAROŠ, J.; POSPÍCHAL, P. A Fair Comparison of Modern CPUs and GPUs Running the Genetic Algorithm under the Knapsack Benchmark. Lecture Notes in Computer Science, 2012, vol. 2012, no. 7248, p. 426-435. ISSN: 0302-9743. Detail

  JAROŠ, J.; TREEBY, B.; RENDELL, A. Use of Multiple GPUs on Shared Memory Multiprocessors for Ultrasound Propagation Simulations. In Australasian Symposium on Parallel and Distributed Computing (AusPDC 2012). Melbourne: 2012. p. 43-52. ISBN: 978-1-921770-08-1. Detail

  NANDAPALAN, N.; JAROŠ, J.; TREEBY, B.; RENDELL, A. Implementation of 3D FFTs across Multiple GPUs in Shared Memory Environments. In Parallel and Distributed Computing, Applications and Technologies, PDCAT Proceedings. Beijing: 2012. p. 167-172. ISBN: 978-0-7695-4879-1. Detail

  TREEBY, B.; JAROŠ, J.; RENDELL, A.; COX, B. Modeling nonlinear ultrasound propagation in heterogeneous media with power law absorption using a k-space pseudospectral method. Journal of the Acoustical Society of America, 2012, vol. 131, no. 6, p. 4324-4336. ISSN: 1520-8524. Detail

  WANG, K.; TEOH, E.; JAROŠ, J.; TREEBY, B. Modelling Nonlinear Ultrasound Propagation in Absorbing Media using the k-Wave Toolbox: Experimental Validation. In IEEE International Ultrasonics Symposium, IUS. Dresden: Institute of Electrical and Electronics Engineers, 2012. p. 523-526. ISBN: 978-1-4673-4561-3. Detail

• 2011

  DVOŘÁK, V.; JAROŠ, J. A Programmable Interconnection Network for Multiple Communication Patterns. Proceedings of the Sixth International Conference on Systems, ICONS 2011. St. Maarten: International Academy, Research, and Industry Association, 2011. p. 6-11. ISBN: 978-1-61208-002-4. Detail

  JAROŠ, J.; DVOŘÁK, V. Optimizing Collective Communications on the K-port Spidergon Network. Proceedings of the Sixth International Conference on Systems, ICONS 2011. St. Maarten: International Academy, Research, and Industry Association, 2011. p. 24-29. ISBN: 978-1-61208-002-4. Detail

  JAROŠ, J.; DVOŘÁK, V. Evolutionary Design of Collective Communications on Wormhole NoCs. In Autonomic Networking-On-Chip: Bio-Inspired Specification, Development, and Verification. Embedded Multi-Core Systems. London: CRC Press LLC, 2011. p. 60-94. ISBN: 978-1-4398-2911-0. Detail

  POSPÍCHAL, P.; JAROŠ, J.; SCHWARZ, J. Acceleration of Grammatical Evolution Using Graphics Processing Units. 7th Doctoral Workshop on Mathematical and Engineering Methods in Computer Science. Brno: Vysoké učení technické v Brně, 2011. s. 125-125. ISBN: 978-80-214-4305-1. Detail

  POSPÍCHAL, P.; SCHWARZ, J.; JAROŠ, J. Acceleration of grammatical evolution using graphics processing units: computational intelligence on consumer games and graphics hardware. In Genetic and Evolutionary Computation Conference, GECCO'11 - Companion Publication. New York: Association for Computing Machinery, 2011. p. 431-438. ISBN: 978-1-4503-0690-4. Detail

• 2010

  DVOŘÁK, V.; JAROŠ, J. Optimizing Collective Communications on 2D-Mesh and Fat Tree NoC. In 9th International Conference on Networks, ICN 2010. Piscataway, NJ: IEEE Computer Society, 2010. p. 22-27. ISBN: 978-0-7695-3979-9. Detail

  JAROŠ, J. Evolutionary Design of Collective Communications on Wormhole Networks. Brno: Publishing house of Brno University of Technology VUTIUM, 2010. 183 p. ISBN: 978-80-214-4208-5. Detail

  JAROŠ, J.; DVOŘÁK, V. Evolutionary-Based Conflict-Free Scheduling of Collective Communications on Spidergon NoCs. In Proceedings of the 12th Annual Genetic and Evolutionary Computation Conference, GECCO '10. New York: Association for Computing Machinery, 2010. p. 1171-1178. ISBN: 978-1-4503-0072-8. Detail

  KOTÁSEK, Z.; BIDLO, M.; JAROŠ, J. Počítačové architektury a diagnostika. Brno: Fakulta informačních technologií VUT v Brně, 2010. s. 0-0. ISBN: 978-80-214-4140-8. Detail

  POSPÍCHAL, P.; JAROŠ, J.; SCHWARZ, J. Parallel Genetic Algorithm on the CUDA Architecture. 6th Doctoral Workshop on Mathematical and Engineering Methods in Computer Science. Brno: Masaryk University, 2010. p. 210-2011. ISBN: 978-80-87342-10-7. Detail

  POSPÍCHAL, P.; JAROŠ, J.; SCHWARZ, J. Parallel Genetic Algorithm on the CUDA Architecture. In Applications of Evolutionary Computation. Lecture Notes in Computer Science. Berlin Heidelberg: Springer Verlag, 2010. p. 442-451. ISBN: 978-3-642-12238-5. Detail

  POSPÍCHAL, P.; SCHWARZ, J.; JAROŠ, J. Parallel Genetic Algorithm Solving 0/1 Knapsack Problem Running on the GPU. In 16th International Conference on Soft Computing MENDEL 2010. Brno: Brno University of Technology, 2010. p. 64-70. ISBN: 978-80-214-4120-0. Detail

• 2009

  JAROŠ, J. Evolutionary Optimization of Multistage Interconnection Networks Performance. In Proceeding of Genetic and Evolutionary Computation Conference, GECCO 2009. New York: Association for Computing Machinery, 2009. p. 1537-1544. ISBN: 978-1-60558-325-9. Detail

  JAROŠ, J.; SCHWARZ, J. Parallel BMDA with an Aggregation of Probability Models. In Proceeding of 2009 IEEE Congress on Evolutionary Computation. Trondheim: IEEE Computational Intelligence Society, 2009. p. 1683-1690. ISBN: 978-1-4244-2959-2. Detail

  SEKANINA, L.; VAŠÍČEK, Z.; RŮŽIČKA, R.; BIDLO, M.; JAROŠ, J.; ŠVENDA, P. Evoluční hardware: Od automatického generování patentovatelných invencí k sebemodifikujícím se strojům. Edice Gerstner. Edice Gerstner. Praha: Nakladatelství Academia, 2009. 328 s. ISBN: 978-80-200-1729-1. Detail

• 2008

  JAROŠ, J. Evolutionary Design of Fault Tolerant Collective Communications. In Evolvable Systems: From Biology to Hardware. Lecture Notes in Computer Science. Berlin: Springer Verlag, 2008. p. 261-272. ISBN: 978-3-540-85856-0. Detail

  JAROŠ, J.; DVOŘÁK, V. An Evolutionary Design Technique for Collective Communications on Optimal Diameter-Degree Networks. In 2008 Genetic and Evolutionary Computational Conference GECCO. New York: Association for Computing Machinery, 2008. p. 1539-1546. ISBN: 978-1-60558-131-6. Detail

  JAROŠ, J.; SCHWARZ, J. Evolutionary Design of Wormhole Switched Collective Communications. Proceedings of Junior Scientist Conference 2008. Vienna: Technische Universität Wien, 2008. s. 111-112. ISBN: 978-3-200-01612-5. Detail

  SCHWARZ, J.; JAROŠ, J. Parallel Bivariate Marginal Distribution Algorithm with Probability Model Migration. In Linkage in Evolutionary Computation. LNSC, Studies in Computational Intelligence Vol. 157. Berlin / Heidelberg: Springer Verlag, 2008. p. 3-23. ISBN: 978-3-540-85067-0. Detail

• 2007

  DVOŘÁK, V.; JAROŠ, J.; OHLÍDAL, M. Optimum Topology-Aware Scheduling of Many-to-Many Collective Communications. In Proceedings of The Sixth International Conference on Networking. New York: IEEE Computer Society, 2007. p. 1-6. ISBN: 0-7695-2805-8. Detail

  JAROŠ, J. Optimalizace kolektivních komunikací na wormhole propojovacích sítích. Sborník příspěvků semináře Počítačové architektury a diagnostika pro studenty doktorského studia. Plzeň: Západočeská univerzita v Plzni, 2007. s. 93-98. ISBN: 987-80-7043-605-9. Detail

  JAROŠ, J.; OHLÍDAL, M.; DVOŘÁK, V. An Evolutionary Approach to Collective Communication Scheduling. In 2007 Genetic and Evolutionary Computation Conference. Volume II. New York: Association for Computing Machinery, 2007. p. 2037-2044. ISBN: 978-1-59593-697-4. Detail

  JAROŠ, J.; SCHWARZ, J. Parallel BMDA with Probability Model Migration. In Proceeding of 2007 IEEE Congress on Evolutionary Computation. Singapore: IEEE Computer Society, 2007. p. 1059-1066. ISBN: 1-4244-1340-0. Detail

  SCHWARZ, J.; JAROŠ, J.; OČENÁŠEK, J. Migration of Probabilistic Models for Island-Based Bivariate EDA Algorithm. In 2007 Genetic and Evolutionary Computational Conference. Volume I. New York: Association for Computing Machinery, 2007. p. 631-631. ISBN: 978-1-59593-697-4. Detail

• 2006

  JAROŠ, J. Evoluční optimalizace skupinových komunikačních vzorů. Zborník príspevkouv pracovného semináre Počítačové architektúry a diagnostika pre studenty doktorského štúdia. Bratislava: Ústav informatiky Slovenskej akadémie vied, 2006. s. 31-36. ISBN: 80-969202-2-7. Detail

  JAROŠ, J.; DVOŘÁK, V. Evolutionary Design of OAB and AAB Communication Schedules for Networking Systems on Chips. In MEMICS 2006 Second Doctoral Workshop on Mathematical and Engineering Methods in Computer Science. Mikulov: Masaryk University, 2006. p. 63-68. ISBN: 80-214-3287-X. Detail

  JAROŠ, J.; DVOŘÁK, V. Evolutionary Design of OAB and AAB Communication Schedules for Networking Systems on Chips. In Proc. of 2006 IEEE Design and Diagnostics of Electronic Circuits and Systems Workshop. Praha: IEEE Computer Society, 2006. p. 222-223. ISBN: 1-4244-0184-4. Detail

  JAROŠ, J.; OHLÍDAL, M.; DVOŘÁK, V. Complexity of Collective Communications on NoCs. In Proc. of 5th International Symposium on Parallel Computing in Electrical Engineering. Los Alamitos, CA 90720-1314: IEEE Computer Society, 2006. p. 127-132. ISBN: 0-7695-2554-7. Detail

  OHLÍDAL, M.; JAROŠ, J.; DVOŘÁK, V. Performance of Collective Communications on Interconnection Networks with Fat Nodes and Edges. In Proceedings of the Fifth International Conference on Networking ICN 2006. Los Alamitos: IEEE Computer Society, 2006. p. 619-624. ISBN: 0-7695-2570-9. Detail

  OHLÍDAL, M.; JAROŠ, J.; DVOŘÁK, V.; SCHWARZ, J. Evolutionary Design of OAB and AAB Communication Schedules for Interconnection Networks. In EvoStar 2006. Lecture Notes in Computer Science. Berlin: Springer Verlag, 2006. p. 267-278. ISBN: 978-3-540-33237-4. Detail

• 2005

  JAROŠ, J. Hledání optimálních plánů skupinové komunikace OAB. Sborník příspěvků ze semináře Počítačové Architektury a Diagnostika. Karlovo náměstí 13, Praha: České vysoké učení technické, 2005. s. 67-72. ISBN: 80-01-03298-1. Detail

  JAROŠ, J.; DVOŘÁK, V. Speeding-up OAS and AAS Communication in Networking System on Chips. Proc. of 8th IEEE Workshop on Design and Diagnostic of Electronic Circuits and Systems. Sopron: University of West Hungary, 2005. p. 206-209. ISBN: 9639364487. Detail

  JAROŠ, J.; OHLÍDAL, M.; DVOŘÁK, V. Evolutionary Design of Group Communication Schedules for Interconnection Networks. In Proceedings of the 20th International Symposium Computer and Information Sciences - ISCIS 2005. Lecture Notes in Computer Science. Berlin: Springer Verlag, 2005. p. 472-481. ISBN: 978-3-540-29414-6. Detail

• 2004

  JAROŠ, J. Úloha plánování procesů na paralelním multiprocesorovém systému pomocí bayesovských optimalizačních algoritmů. Zborník príspevkov ze seminara Počítačové Architektury a Diagnostika. Bratislava: Slovenská technická univerzita v Bratislavě, 2004. s. 60-65. ISBN: 80-969202-0-0. Detail

  JAROŠ, J. Vývojové prostředky pro rychlé prototypování genetických algoritmů. Brno: Grantová agentura České republiky, 2004. s. 0-0. Detail

  JAROŠ, J.; SCHWARZ, J. Development tools for rapid prototyping of evolutionary algorithms. Proceedings of 38th International conference MOSIS'04. Rožnov pod Radhoštěm: Marq software s.r.o., 2004. p. 97-104. ISBN: 80-85988-98-4. Detail

  SCHWARZ, J.; JAROŠ, J. A PROBLEM KNOWLEDGE BASED BAYESIAN OPTIMIZATION ALGORITHM APPLIED IN MULTIPROCESSOR SCHEDULING. Mendel Conference on Soft Computing. Brno: Faculty of Mechanical Engineering BUT, 2004. p. 83-88. ISBN: 80-214-2676-4. Detail

  SCHWARZ, J.; OČENÁŠEK, J.; JAROŠ, J. Advanced Bayesian Optimization Algorithms Applied in Decomposition Problems. In Proceedings of ECBS 2004. Los Alamitos: IEEE Computer Society, 2004. p. 102-111. ISBN: 0-7695-2125-8. Detail